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Scientific Computing and Visualisation: Publications

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GPU Computing
[link]Fluke, C.J., Barnes, D.G., Barsdell, B.R., Hassan, A.H., 2011, Astrophysical Supercomputing with GPUs: Critical Decisions for Early Adopters, Publications of the Astronomical Society of Australia, 28, 15
[link]van Straten, W., Bailes, M., DSPSR: Digital Signal Processing Software for Pulsar Astronomy, PASA, 28, 1
[link]Barsdell, B.R., Barnes, D.G., Fluke, C.J., 2010, Analysing astronomy algorithms for graphics processing units and beyond, MNRAS, 408, 1936
[link]Bate, N.F., Fluke, C.J., Barsdell, B.R., Garsden, H., Lewis, G.F. 2010, Computational advances in gravitational microlensing: a comparison of CPU, GPU, and parallel, large data codes, New Astronomy, 15, 726
[link]Thompson, A.C., Fluke, C.J., Barnes, D.G., Barsdell, B.R. 2010, Teraflop per second gravitational lensing ray-shooting using graphics processing units, New Astronomy, 15, 16
[link]Barsdell, B.R., Barnes, D.G., Fluke, C.J., Advanced Architectures for Astrophysical Supercomputing, ADASS XIX, Sapporo, Japan, October 2009 (arXiv:1001.2048)

Astronomy visualisation
[link]Hassan, A.H., Fluke, C.J., Barnes, D.G., 2011, New Astronomy, Interactive Visualisation of the Largest Radioastronomy Cubes, 16, 100
[link]Hassan, A.H., Fluke, C.J., Barnes, D.G., Distributed GPU Volume Rendering of ASKAP Spectral Data Cubes, ADASS XX, Boston, MA, USA, November 2010 (arXiv:1012.2909)
[link]Fluke, C.J., Barnes, D.G., Hassan, A.H., Visualisation and Analysis Challenges for WALLABY, Proceedings of the Sixth IEEE International Conference on e-Science Workshops; Brisbane, Australia, December 2010 (arXiv:1012.2901)
[link]Hassan, A. Fluke, C.J., Barnes, D.G., GPU-based Volume Rendering of Noisy Multi-Spectral Astronomical Data, ADASS XIX, Sapporo, Japan, October 2009 (arXiv:1001.2049)
[link] Fluke, C.J., Bourke, P.D., O'Donovan, D. 2006, Future Directions in Astronomy Visualization, Publications of the Astronomical Society of Australia, 23, 12

S2PLOT
[link]Barnes, D.G., Fluke, C.J., Bourke, P.D., Parry, O.T. 2006, An Advanced, Three-Dimensional Plotting Library for Astronomy, Publications of the Astronomical Society of Australia, 23, 82
[link]Barnes, D.G., Fluke, C.J., 2008, S2PLOT: a Straightforward Library for Advanced 3-dimensional Scientific Visualisation, ADASS XVII, ASP Conference Series, 394, ed. R.W. Argyle, P.S. Bunclark, J.R. Lewis, 149

3D-PDF and s2web
[link]Barnes, D.G., Fluke, C.J. 2008, Incorporating interactive 3-dimensional graphics in astronomy research papers, New Astronomy, 13, 599
[link]Fluke, C.J., Barnes, D.G., Jones, N.T. 2009, Interchanging Interactive 3-d Graphics for Astronomy, Publications of the Astronomical Society of Australia, 26(1), 37

Applications and related work
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[figures]
Ruthensteiner, B., Baeumler, N., Barnes, D.G., 2010, Interactive 3D Volume Rendering in Biomedical Publications, Micron, 41, 886
[link]Mitik-Deneva, N., Wang, J., Truong, V.K., Stoddart, P.R., Alexander, M.R., Albutt, D.J., Fluke, C., Crawford, R.J., Ivanova, E.P. 2010, Bacterial attachment on optical fibre surfaces, Biofouling, 26, 461
[link]Truong, V.K., Lapovok, R., Estrin, Y., Rundell, S., Wang, J., Fluke, C.J., Crawford, R.J., Ivanova, E.P., 2010, The Influence of Nano-scale Surface Roughness on Bacterial Adhesion to Ultrafine-Grained Titanium, Biomaterials, 31, 3674
[link] Ivanova, E., Truong, V.K., Wang, J., Bendt, C., Jones, R., Schmidt, H., Yusuf, I., Peak, I., Fluke, C., Barnes, D., Crawford, R., 2010, Impact of Nanoscale Roughness of Titanium Thin Films Surfaces on Bacterial Retention, Langmuir, 26, 1973
[link]Truong, V.K., Rundell, S., Lapovok, R., Estrin, Y., Wang, J.Y., Berndt, C.C., Barnes, D., Fluke, C.J., Crawford, R.J., Ivanova, E.P. 2009, Effect of ultrafine-grained titanium surfaces on adhesion of bacteria, Applied Microbiology and Biotechnology, 83(5), 925
[link]Fluke, C.J., English, J., Barnes, D.G., Visualization-Directed Interactive Model Fitting to Spectral Data Cubes, ADASS XIX, Sapporo, Japan, October 2009 (arXiv:1001.2043)
[link]Barnes, D.G., Fluke, C.J., 2008, Visualising the Local Volume, in Galaxies in the Local Volume, Astrophysics and Space Science Proceedings, ISBN 978-1-4020-6932-1, 183
[link] Fluke, C.J., Barnes, D.G. 2008, The Interactive Astronomy Textbook, Astronomy Education Review, 7, 113
[link]Fluke, C.J., Barnes, D.G., 2008, Customized Cosmological Visualization, ADASS XVII, ASP Conference Series, 394, ed. R.W. Argyle, P.S. Bunclark, J.R. Lewis, 327

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